parsl.providers.GridEngineProvider
- class parsl.providers.GridEngineProvider(nodes_per_block=1, init_blocks=1, min_blocks=0, max_blocks=1, parallelism=1, walltime='00:10:00', scheduler_options='', worker_init='', launcher=SingleNodeLauncher(debug=True, fail_on_any=False), cmd_timeout: int = 60, queue=None)[source]
A provider for the Grid Engine scheduler.
- Parameters:
nodes_per_block (int) – Nodes to provision per block.
min_blocks (int) – Minimum number of blocks to maintain.
max_blocks (int) – Maximum number of blocks to maintain.
parallelism (float) – Ratio of provisioned task slots to active tasks. A parallelism value of 1 represents aggressive scaling where as many resources as possible are used; parallelism close to 0 represents the opposite situation in which as few resources as possible (i.e., min_blocks) are used.
walltime (str) – Walltime requested per block in HH:MM:SS.
scheduler_options (str) – String to prepend to the #$$ blocks in the submit script to the scheduler.
worker_init (str) – Command to be run before starting a worker, such as ‘module load Anaconda; source activate env’.
launcher (Launcher) – Launcher for this provider. Possible launchers include
SingleNodeLauncher
(the default),cmd_timeout (int) – Timeout for commands made to the scheduler in seconds
- __init__(nodes_per_block=1, init_blocks=1, min_blocks=0, max_blocks=1, parallelism=1, walltime='00:10:00', scheduler_options='', worker_init='', launcher=SingleNodeLauncher(debug=True, fail_on_any=False), cmd_timeout: int = 60, queue=None)[source]
Methods
__init__
([nodes_per_block, init_blocks, ...])cancel
(job_ids)Cancels the resources identified by the job_ids provided by the user.
execute_wait
(cmd[, timeout])get_configs
(command, tasks_per_node)Compose a dictionary with information for writing the submit script.
status
(job_ids)Get the status of a list of jobs identified by the job identifiers returned from the submit request.
submit
(command, tasks_per_node[, job_name])The submit method takes the command string to be executed upon instantiation of a resource most often to start a pilot.
Attributes
cores_per_node
Number of cores to provision per node.
label
Provides the label for this provider
mem_per_node
Real memory to provision per node in GB.
Returns the interval, in seconds, at which the status method should be called.
- cancel(job_ids)[source]
Cancels the resources identified by the job_ids provided by the user.
- Parameters:
job_ids (-) – A list of job identifiers
- Returns:
A list of status from cancelling the job which can be True, False
- Raises:
- ExecutionProviderException or its subclasses –
- get_configs(command, tasks_per_node)[source]
Compose a dictionary with information for writing the submit script.
- property status_polling_interval[source]
Returns the interval, in seconds, at which the status method should be called.
- Returns:
the number of seconds to wait between calls to status()
- submit(command, tasks_per_node, job_name='parsl.sge')[source]
The submit method takes the command string to be executed upon instantiation of a resource most often to start a pilot.
- Args :
command (str) : The bash command string to be executed.
tasks_per_node (int) : command invocations to be launched per node
- KWargs:
job_name (str) : Human friendly name to be assigned to the job request
- Returns:
A job identifier, this could be an integer, string etc
- Raises:
- ExecutionProviderException or its subclasses –